The best museums in Japan in September 2025

These are the top 100 best museums in Japan, ranked by their rating and popularity in 2025. Click a museum for more information about the museum, including visitor information, exhibitions and reviews.

For a complete overview of museums in Japan, their exhibitions and discount cards & passes, see our overview page with all museums in Japan.

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Looking for the best museums in Japan? These are the best ones:

  1. Ghibli Museum1

    Ghibli Museum

     Mitaka
    If you are an anime lover, this is an absolute must-see for you. The museum itself has massive exhibitions (that they change annually), starting with the Spirited Away Exhibit in 2001. It also has a permanent exhibition showing the process of creating an animated movie. As a special treat to the gue
  2. teamLab Borderless2

    teamLab Borderless

     Tokyo
    TeamLab Borderless is a unique immersive and digital art museum that was launched in 2018 in Tokyo. The museum was designed and created by TeamLab, an international creative group consisting of various specialists including artists, programmers, engineers, animators, mathematicians, and architects. The aim of the museum is to explore the relationship between the self, the world, and new perceptions through art, as well as the continuity of time.
  3. Osaka Aquarium Kaiyukan3

    Osaka Aquarium Kaiyukan

     Osaka Prefecture
    The Osaka Aquarium Kaiyukan is a large public aquarium located in Osaka, Japan. It is not just one aquarium but a series of aquariums built around one massive water tank. This unique design allows visitors to experience a variety of marine life in different environments, all within the same facility.
  4. Arashiyama Monkey Park Iwatayama4

    Arashiyama Monkey Park Iwatayama

     Kyoto
    Iwatayama Monkey Park is a commercial park situated in Arashiyama, Kyoto, Japan. The park is located on Mount Arashiyama, providing visitors with a unique opportunity to interact with nature and wildlife in a serene setting. The park's location offers a panoramic view of the city, making it a popular destination for tourists.
  5. Ueno Zoo5

    Ueno Zoo

     Tokyo
    The Ueno Zoo, located in Taitō, Tokyo, Japan, is a 14.3-hectare zoo managed by the Tokyo Metropolitan Government. As Japan's oldest zoo, it has a rich history dating back to its opening on March 20, 1882.
  6. Matsumoto Castle6

    Matsumoto Castle

     Matsumoto
  7. Hiroshima Castle7

    Hiroshima Castle

     Hiroshima
    Also known as Carp Castle, the castle was built in the 1590s by the feudal lord Mori Terumoto. After it was destroyed by the atomic bombing in 1945, it was rebuilt and now it serves as a history museum. The exhibition is devoted to the history of Hiroshima and to the castle itself but also to Japa
  8. Shin-Yokohama Rāmen Museum8

    Shin-Yokohama Rāmen Museum

     Yokohama
    The Shin-Yokohama Rāmen Museum is a unique food-themed amusement park situated in the Shin-Yokohama district of Kōhoku-ku, Yokohama, Japan. This museum is dedicated to the Japanese noodle soup, rāmen, and draws inspiration from Tokyo in 1958, the year when instant noodles were first created. It offers a unique experience for visitors to immerse themselves in the rich history and culture of rāmen.
  9. Tokyo Sea Life Park9

    Tokyo Sea Life Park

     Edogawa
  10. Edo Tokyo Museum10

    Edo Tokyo Museum

     Tokyo
    The Edo-Tokyo Museum is a historical museum situated in Sumida, Tokyo. It is dedicated to preserving the history of Edo (old Tokyo) and the transition to the modern city it is today. The museum's name is a combination of the city's old name, Edo, and its current name, Tokyo.
  11. Miraikan-The National Museum of Emerging Science and Innovation11

    Miraikan-The National Museum of Emerging Science and Innovation

     Tokyo
    The National Museum of Emerging Science and Innovation, also known as the Miraikan, is a museum dedicated to showcasing the latest advancements in science and technology. It was established by Japan's Science and Technology Agency and opened its doors to the public in 2001. The museum is located in the Odaiba District of Tokyo and is easily accessible from downtown Tokyo via the Yurikamome driverless fully automated transit system.
  12. Yasukuni Shrine12

    Yasukuni Shrine

     Tokyo
    The Yasukuni Shrine was established in June 1869 at the behest of Emperor Meiji as a memorial to those who died in the Boshin War. Initially, it was named Tōkyō Shōkonsha (東京招魂社), but it was later renamed Yasukuni Jinja in 1879. This historical background adds to the cultural significance of the shrine.
  13. Hakone Shrine13

    Hakone Shrine

     Hakone
    After being built at the summit of a nearby mountain in 757, the shrine was moved to its current location in 1667. This shining red Japanese Shinto shrine also houses a small museum. An annual festival is held here on August 1. It is located only a short walk from the Moto-Hakone boat pier.
  14. Hasedera Museum14

    Hasedera Museum

     Kamakura
  15. Sapporo Beer Museum15

    Sapporo Beer Museum

     Sapporo
    The Sapporo Beer Museum is situated in the Sapporo Garden Park in Higashi-ku, Sapporo, Hokkaidō, Japan. This location is easily accessible and offers a unique cultural experience for tourists interested in the history of beer production in Japan.
  16. National Museum of Western Art16

    National Museum of Western Art

     Tokyo
    The National Museum of Western Art (NMWA) is a public art museum located in Tokyo, Japan. It is dedicated to the exhibition and preservation of Western arts. The museum provides an opportunity for visitors to explore and appreciate a wide range of Western art forms.
  17. Okochi Sanso Garden17

    Okochi Sanso Garden

     Kyoto
    Ōkōchi Sansō, located in Arashiyama, Kyoto, is the former residence and garden of Denjirō Ōkōchi, a renowned actor in Japanese period films. This historic site offers visitors a glimpse into the life of the actor and the era in which he lived. The villa and its gardens are open to the public, providing a unique opportunity to explore a piece of Japanese history and culture.
  18. Osaka Museum of History18

    Osaka Museum of History

     Osaka Prefecture
    The Osaka Museum of History, colloquially known as "Rekihaku", is a modern high-rise building located in Osaka, Japan. The museum presents a comprehensive view of Japanese history, with a particular emphasis on the city of Osaka. The museum's exhibits start from the 10th floor and descend to the 7th floor, with special exhibitions extending to the 6th floor.
  19. Kyoto International Manga Museum19

    Kyoto International Manga Museum

     Kyoto
    The Kyoto International Manga Museum is situated in Nakagyō-ku, a district in Kyoto, Japan. This location is easily accessible and offers a unique cultural experience for tourists interested in manga and Japanese culture.
  20. National Museum of Nature and Science20

    National Museum of Nature and Science

     Taito
  21. Japanese Sword Museum21

    Japanese Sword Museum

     Sumida
  22. The National Art Center, Tokyo22

    The National Art Center, Tokyo

     Minato
  23. Kyoto National Museum23

    Kyoto National Museum

     Kyoto
    The Kyoto National Museum, situated in Kyoto's Higashiyama ward, is one of Japan's major art museums. It primarily focuses on pre-modern Japanese and Asian art, offering visitors a deep dive into the rich history and culture of the region. The museum's collection is vast and diverse, providing a comprehensive overview of the artistic traditions of Japan and Asia.
  24. Nagasaki Atomic Bomb Museum24

    Nagasaki Atomic Bomb Museum

     Nagasaki
  25. 21st Century Museum of Contemporary Art, Kanazawa25

    21st Century Museum of Contemporary Art, Kanazawa

     Kanazawa
  26. Kawaguchiko Music Forest26

    Kawaguchiko Music Forest

     Fujikawaguchiko
    Though small in size, this amusement park is one of its kind. Focused on musical instruments, music will encompass you the second you enter. It is home to a museum of historical music boxes, a singing fountain, and also European-inspired gardens.
  27. The Hakone Open-Air Museum27

    The Hakone Open-Air Museum

     Hakone
  28. CupNoodles Museum Yokohama28

    CupNoodles Museum Yokohama

     Yokohama
    The Cup Noodles Museum, with locations in Yokohama, Ikeda, and Hong Kong, is dedicated to the life of Momofuku Andō and his invention of instant noodles. The first museum was inaugurated in Yokohama in 2011. This museum provides an insight into the life and work of Momofuku Andō, the Taiwanese-Japanese entrepreneur who introduced the first instant noodles to the market on August 25, 1958.
  29. Sapporo Clock Tower29

    Sapporo Clock Tower

     Sapporo
    The Sapporo Clock Tower is a notable wooden structure situated in Chūō-ku, Sapporo, the largest city on the island of Hokkaidō, Japan. As a significant tourist attraction, it holds a unique place in the city's landscape and is easily accessible for visitors.
  30. National Museum of Modern Art, Tokyo - MOMAT30

    National Museum of Modern Art, Tokyo - MOMAT

     Chiyoda
  31. Gekkeikan Okura Sake Museum31

    Gekkeikan Okura Sake Museum

     Kyoto
  32. Okinawa Churaumi Aquarium32

    Okinawa Churaumi Aquarium

     Motobu
  33. Historical Village of Hokkaido33

    Historical Village of Hokkaido

     Sapporo
    The Historical Village of Hokkaido is an open-air museum located in Sapporo, Hokkaidō, Japan. This museum offers a unique opportunity to explore the history and culture of Hokkaido in an immersive outdoor setting.
  34. Yayoi Kusama Museum34

    Yayoi Kusama Museum

     Tokyo
    The Yayoi Kusama Museum is a contemporary art museum located in Tokyo, Japan. It is dedicated to showcasing the work of renowned Japanese artist Yayoi Kusama. The museum provides an in-depth look into Kusama's artistic journey and her unique style that has made a significant impact on the global art scene.
  35. Nezu Museum35

    Nezu Museum

     Minato
  36. Aomori Museum of Art36

    Aomori Museum of Art

     Aomori Prefecture
  37. Pola Museum of Art37

    Pola Museum of Art

     Hakone
  38. 21_21 Design Sight38

    21_21 Design Sight

     Minato
  39. Nagai Botanical Garden39

    Nagai Botanical Garden

     Osaka Prefecture
    The Nagai Botanical Garden is a spacious 8-hectare botanical garden nestled in the southeast corner of Nagai Park in Osaka, Japan. This location offers a serene and natural environment for visitors to explore and enjoy. The garden is easily accessible and provides a tranquil escape from the bustling city life.
  40. Manyo Botanical Garden40

    Manyo Botanical Garden

     Nara
  41. Toyota Commemorative Museum of Industry and Technology41

    Toyota Commemorative Museum of Industry and Technology

     Nagoya
    The Toyota Commemorative Museum of Industry and Technology, also referred to as the Toyota Tecno Museum, is a museum that focuses on the history of technology and industry. It provides a comprehensive overview of the evolution of these sectors, making it an interesting destination for those interested in understanding the technological advancements and industrial developments over the years.
  42. The Museum of Kyoto42

    The Museum of Kyoto

     Kyoto
    The Museum of Kyoto is a cultural institution that focuses on the history and culture of Kyoto. It provides a comprehensive overview of the city's past, from its ancient origins to its modern developments. Visitors can explore a variety of exhibits that showcase the unique traditions, arts, and historical events that have shaped Kyoto over the centuries.
  43. Nagoya City Municipal Archives Museum43

    Nagoya City Municipal Archives Museum

     Nagoya
    The Nagoya City Municipal Archives is a historic building situated in the city of Nagoya, in the Aichi Prefecture of Japan. This building holds significant historical value and provides a glimpse into the architectural trends of the past.
  44. Tokyo Metropolitan Art Museum44

    Tokyo Metropolitan Art Museum

     Tokyo
    The Tokyo Metropolitan Art Museum, situated in the scenic Ueno Park in Tokyo, Japan, is a government-supported institution. This location offers visitors the opportunity to combine a visit to the museum with a stroll through the park, making it an ideal destination for art and nature lovers alike.
  45. Naramachi Karakuri Toy Museum45

    Naramachi Karakuri Toy Museum

     Nara
    Opened in 2012, this museum invites all children to come and play with their collections of traditional Japanese toys. Suitable for adults as well.
  46. Meiji Memorial Picture Gallery46

    Meiji Memorial Picture Gallery

     Shinjuku
  47. Ashikaga Flower Park47

    Ashikaga Flower Park

     Ashikaga
    One of the most beautiful botanical gardens in Japan, Ashikaga Flower Park is known for its great Japanese Wisteria flower, a vine which blooms in light purple and pink. It is huge - covers almost an acre of the park! As of April 2018, you can get to this botanical garden by train as a train statio
  48. Matsumoto City Museum of Art48

    Matsumoto City Museum of Art

     Matsumoto
  49. Takayama Jin’ya49

    Takayama Jin’ya

     Takayama
  50. Odawara Castle50

    Odawara Castle

     Odawara
    Originally built in the 15th century, this castle, which was rebuilt and destroyed many times, now houses a history museum focused on the city and the castle's history. It also offers splendid views of the area. When entering the castle grounds, be sure to take a look at the magnificent gates. Once
  51. Marine World Uminonakamichi51

    Marine World Uminonakamichi

     Fukuoka Prefecture
    Opened in 1989, this marine world features 70 aquariums full of marine animals and plants. Be sure to check the schedule and see one of its famous shows, such as Dolphin and Sea Lion show and Sea Otter feedings.
  52. Osaka International Peace Center52

    Osaka International Peace Center

     Osaka
    The Osaka International Peace Center, also known as Peace Osaka, is a peace museum that was established in August 1991. Located in the city of Osaka, Japan, the museum is dedicated to the themes of war and peace, with a particular focus on the destruction of Osaka during World War II.
  53. Chichu Art Museum53

    Chichu Art Museum

     Naoshima
  54. Meguro Parasitological Museum54

    Meguro Parasitological Museum

     Tokyo
    The Meguro Parasitological Museum, located in the Meguro Ward of central Tokyo, Japan, is a unique science museum dedicated to the study of parasites and parasitology. This museum offers a unique opportunity to learn about a diverse range of parasites and their life cycles.
  55. Hiroshima National Peace Memorial Hall for the Atomic Bomb Victims55

    Hiroshima National Peace Memorial Hall for the Atomic Bomb Victims

     Hiroshima
    The memorial hall was built in 2002 by Kenzo Tange to commemorate the victims of the nuclear attack. The institution stores memories and stories from the survivors, photographs, and names of the victims.
  56. Kanazawa Confectionery Wooden Molds Museum56

    Kanazawa Confectionery Wooden Molds Museum

     Kanazawa
    Visit this museum and explore the exhibition on typical Japanese sweets. Later you can go downstairs to the Morihachi Honten sweets store and buy some candy for yourself.
  57. Osaka Science Museum57

    Osaka Science Museum

     Osaka Prefecture
    The Osaka Science Museum is situated in the heart of Osaka, Japan, nestled between the Dōjima River and the Tosabori River. It is uniquely positioned above the subterranean National Museum of Art, making it a distinctive landmark in the city. The museum's location offers visitors the opportunity to explore the surrounding area and enjoy the scenic riverside views.
  58. Osaka City Museum of Fine Arts58

    Osaka City Museum of Fine Arts

     Osaka Prefecture
    The Osaka City Museum of Fine Arts, located in the Tennōji district of Osaka, is a significant cultural landmark. The museum is situated on the site of the former residence of the Sumitomo family, a prominent Japanese family known for their contributions to various industries. The family donated the land, which includes a traditional Japanese garden, for the establishment of the museum.
  59. Edo-Tokyo Open Air Architectural Museum59

    Edo-Tokyo Open Air Architectural Museum

     Koganei
  60. Maruyama zoo60

    Maruyama zoo

     Sapporo
    The Sapporo-Maruyama Zoo is situated in Chūō-ku, a district of Sapporo, which is the capital city of the Japanese prefecture Hokkaidō. This location makes it easily accessible for tourists visiting the city or the region.
  61. Hida Folk Vilage61

    Hida Folk Vilage

     Takayama
  62. Hakone Venetian Glass Museum62

    Hakone Venetian Glass Museum

     Hakone
    This complex of Italian-styled buildings, with beautiful gardens and a pond, is a place to go if looking for a scenic stroll. You can also visit the Venetian Glass Museum.
  63. Mori Art Museum63

    Mori Art Museum

     Minato
  64. Yamato Museum64

    Yamato Museum

     Kure
  65. Kyushu National Museum65

    Kyushu National Museum

     Dazaifu
    The Kyushu National Museum, also known as Kyūshū Kokuritsu Hakubutsukan, is situated in Dazaifu, close to Fukuoka. The museum's collections primarily revolve around ancient and classical Japanese art, offering visitors a deep dive into the country's rich artistic heritage. The museum's location in Dazaifu, a city known for its historical significance, further enhances the cultural experience.
  66. Sunshine Aquarium66

    Sunshine Aquarium

     Toshima
  67. Benesse House Museum67

    Benesse House Museum

     Naoshima
  68. Sankeien Garden68

    Sankeien Garden

     Yokohama
    Sankei-en is a public park located in Yokohama. It is unique in its collection of buildings that span various centuries and originate from different parts of Japan. This offers visitors a unique opportunity to experience a wide range of Japanese architectural styles and historical periods in one location.
  69. Naramachi Museum69

    Naramachi Museum

     Nara
    Visit this quaint museum if looking for information about Nara, its history, and local culture.
  70. Teshima Art Museum70

    Teshima Art Museum

     Tonosho
  71. Tennoji Zoo71

    Tennoji Zoo

     Osaka Prefecture
    The Tennoji Zoo, located in the Tennoji district of Osaka, Japan, holds a significant place in history as it is the third oldest zoo in the country. It was officially opened to the public on January 1, 1915. This historical significance adds to the charm and appeal of the zoo, making it a notable destination for tourists visiting Osaka.
  72. Kids Plaza Osaka72

    Kids Plaza Osaka

     Osaka Prefecture
    Established in 1997, this entertaining museum is focused mainly on educating kids in an engaging way. It is full of various interactive exhibitions and hands-on workshops, that will keep your kids entertained for a long time. Don't worry about language barriers - all expositions are self-explanatory
  73. Neiraku Museum73

    Neiraku Museum

     Nara
  74. Ishigaki City Yaeyama Museum74

    Ishigaki City Yaeyama Museum

     Ishigaki
  75. JMSDF Kure Museum75

    JMSDF Kure Museum

     Kure
  76. Tokyo Water Science Museum76

    Tokyo Water Science Museum

     Koto
  77. Furukawa Art Museum77

    Furukawa Art Museum

     Nagoya
  78. Shikoku Mura78

    Shikoku Mura

     Takamatsu
  79. Noguchi Yataro Memorial Art Museum79

    Noguchi Yataro Memorial Art Museum

     Nagasaki
  80. Kanazawa Shinise Memorial Hall80

    Kanazawa Shinise Memorial Hall

     Kanazawa
    This building formerly housed a pharmacy that belonged to one of Kanazawa’s most respected families. Nowadays, it is a museum displaying traditional pharmaceutical artefacts. Moreover, you can also explore exhibitions about traditional lifestyle of Kanazawa’s citizens here or meditate in a small, pe
  81. New Yashima Aquarium81

    New Yashima Aquarium

     Takamatsu
  82. The Museum Yamato Bunkakan82

    The Museum Yamato Bunkakan

     Nara
  83. Hiroshima City Museum of History and Traditional Crafts83

    Hiroshima City Museum of History and Traditional Crafts

     Hiroshima
  84. Daigo Fukuryu Maru Exhibition Hall84

    Daigo Fukuryu Maru Exhibition Hall

     Koto
  85. Kofukuji Temple  National Treasure Museum85

    Kofukuji Temple National Treasure Museum

     Nara
  86. TOTO Museum86

    TOTO Museum

     Kitakyushu
    This unique museum displays toilets & tableware made by the Toto company, which celebrated its 100th anniversary in 2016. Entry is free and the whole exhibitions is located in a beautiful modern building, so it is worth a short visit even if you are not interested in toilets.
  87. Yokoo House87

    Yokoo House

     Tonosho
  88. Antarctic Museum and Former Research Ship Fuji88

    Antarctic Museum and Former Research Ship Fuji

     Nagoya
  89. Kitagawa village "Monet's Garden" Marmottan89

    Kitagawa village "Monet's Garden" Marmottan

     Kitagawa
  90. Brush Makers Workshop -Fude-no-sato Kobo90

    Brush Makers Workshop -Fude-no-sato Kobo

     Kumano
  91. Seisonkaku Villa91

    Seisonkaku Villa

     Kanazawa
  92. Japanese Folk Crafts Museum92

    Japanese Folk Crafts Museum

     Tokyo
    The Japanese Folk Crafts Museum, or Nihon mingei-kan, is situated in the Komaba district of Meguro, Tokyo. The museum is dedicated to the collection and display of Japanese and exemplary foreign folk art. It was established in October 1936, thanks to the financial support of entrepreneur and patron Ōhara Magosaburō. The museum's mission is to showcase a selection of beautiful folk art pieces, providing a comprehensive view of this unique art form.
  93. Suginami Animation Museum93

    Suginami Animation Museum

     Suginami
  94. Hara Model Railway Museum94

    Hara Model Railway Museum

     Yokohama
    The Hara Model Railway Museum, located in Nishi-ku, Yokohama, Japan, is a unique destination for model railway enthusiasts. The museum, which opened its doors to the public on 10 July 2012, offers a fascinating insight into the world of model railways.
  95. Basho Memorial Museum95

    Basho Memorial Museum

     Koto
  96. Asahiyama Zoo96

    Asahiyama Zoo

     Asahikawa
  97. Fukagawa Edo Museum97

    Fukagawa Edo Museum

     Koto
    History buffs are going to love this museum. Come and see for yourself what life in Tokyo was like in one of the most famous periods of history in Japan - the 18th century Edo period. The museum is very hands on, you can walk through a reconstruction of the main street of the era, and touch and exa
  98. The Sumida Hokusai Museum98

    The Sumida Hokusai Museum

     Tokyo
    The Sumida Hokusai Museum, located in the Sumida district of Tokyo, is dedicated to the renowned painter Katsushika Hokusai. This museum is a tribute to Hokusai's life and works, offering visitors a unique insight into the artist's world.
  99. Ad Museum Tokyo99

    Ad Museum Tokyo

     Minato
    Tokyo boasts a plethora of museums that document nearly everything you can think of. This museum, opened in 2002, definitely belongs among the more unusual ones - it maps adverts in Japan from as early as the Edo period until today. In addition to that, the museum also aims to promote research of
  100. 5-Days Children's Cultural Science Museum100

    5-Days Children's Cultural Science Museum

     Hiroshima
    Children are allowed not only to observe, but also to touch things in order to understand science in this museum. There's also a planetarium show.

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